help/edit/help -> seg-fault

Ben Abbott bpabbott at mac.com
Sun Apr 26 11:25:06 CDT 2009


To: bug at octave.org
Cc: bpabbott
Subject: help/edit/help -> seg-fault
--------
Bug report for Octave 3.0.5 configured for i386-apple-darwin

Description:
-----------

Running 3.0.5, installed using the Fink package manager, on Mac OSX a  
segmentation fault is produced by the following sequence.

(1) help <m-file in control>
(2) edit <m-file in control>
(3) help <m-file in control>

Where <m-file in control> may be replaced by any m-file in .../octave/ 
3.0.5/m/control/base/. For example, both "place" and "bode" produce  
seg-faults for me.

Repeat-By:
---------

octave:1> help place
  -- Function File: K = place (SYS, P)
      Computes the matrix K such that if the state is feedback with gain
      K, then the eigenvalues  of the closed loop system (i.e. A-BK) are
      those specified in the vector P.

      Version: Beta (May-1997): If you have any comments, please let me
      know.  (see the file place.m for my address)

/sw/share/octave/3.0.5/m/control/base/place.m

Additional help for built-in functions and operators is
available in the on-line version of the manual.  Use the command
`doc <topic>' to search the manual index.

Help and information about Octave is also available on the WWW
at http://www.octave.org and via the help at octave.org
mailing list.
octave:2> edit place
path = /Users/bpabbott/octave/place.m
octave:3> help place
Segmentation fault

Fix:
---

?

Configuration (please do not edit this section):
-----------------------------------------------

uname output:     Darwin bens-macbook.local 9.6.0 Darwin Kernel  
Version 9.6.0: Mon Nov 24 17:37:00 PST 2008; root:xnu-1228.9.59~1/ 
RELEASE_I386 i386
configure opts:   'FLIBS=/sw/lib/gcc4.3/lib/libgfortran.dylib' '-- 
prefix=/sw' 'F77=/sw/bin/gfortran' '--host=i386-apple-darwin' '-- 
build=i386-apple-darwin' '--infodir=/sw/share/info' '--mandir=/sw/ 
share/man' '--libexecdir=/sw/lib' '--enable-shared' '--enable-dl' '-- 
disable-static' '--without-mpi' '--with-hdf5' '--with-fftw' '--with- 
lapack=-Wl,-framework,Accelerate,-dylib_file,/System/Library/ 
Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/ 
Versions/A/libLAPACK.dylib:/System/Library/Frameworks/ 
Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/ 
libLAPACK.dylib' '--with-blas=-Wl,-framework,Accelerate,-dylib_file,/ 
System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/ 
vecLib.framework/Versions/A/libBLAS.dylib:/System/Library/Frameworks/ 
Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/ 
libBLAS.dylib' 'build_alias=i386-apple-darwin' 'host_alias=i386-apple- 
darwin' 'CFLAGS=-O3' 'LDFLAGS=-L/sw/lib' 'CPPFLAGS=-I/sw/include'  
'CXXFLAGS=-O3' 'FFLAGS=-O3'
Fortran compiler: /sw/bin/gfortran
FFLAGS:           -O3 -mieee-fp
F2C:              @F2C@
F2CFLAGS:         @F2CFLAGS@
FLIBS:            /sw/lib/gcc4.3/lib/libgfortran.dylib
CPPFLAGS:         -I/sw/include -I/sw/include
INCFLAGS:         -I. -I. -I./liboctave -I./src -I./libcruft/misc
C compiler:       gcc, version 4.0.1 (Apple Inc. build 5490)
CFLAGS:           -O3
CPICFLAG:         -fPIC
C++ compiler:     g++, version 4.0.1
CXXFLAGS:         -O3
CXXPICFLAG:       -fPIC
LD_CXX:           g++
LDFLAGS:          -L/sw/lib
LIBFLAGS:         -L.
RLD_FLAG:
BLAS_LIBS:        -Wl,-framework,Accelerate,-dylib_file,/System/ 
Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/ 
vecLib.framework/Versions/A/libLAPACK.dylib:/System/Library/Frameworks/ 
Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/ 
libLAPACK.dylib -Wl,-framework,Accelerate,-dylib_file,/System/Library/ 
Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/ 
Versions/A/libBLAS.dylib:/System/Library/Frameworks/ 
Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/ 
libBLAS.dylib
FFTW_LIBS:        -lfftw3
LIBS:             -lreadline  -lncurses -lhdf5 -lz -lm
LEXLIB:
LIBGLOB:
SED:              /sw/bin/sed
DEFS:

   -DPACKAGE_NAME="" -DPACKAGE_TARNAME="" -DPACKAGE_VERSION=""
   -DPACKAGE_STRING="" -DPACKAGE_BUGREPORT="" -DOCTAVE_SOURCE=1
   -D_GNU_SOURCE=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 - 
DHAVE_SYS_STAT_H=1
   -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 - 
DHAVE_STRINGS_H=1
   -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DSEPCHAR=':'
   -DSEPCHAR_STR=":" -D__NO_MATH_INLINES=1 - 
DCXX_NEW_FRIEND_TEMPLATE_DECL=1
   -DCXX_ISO_COMPLIANT_LIBRARY=1 -DCXX_ABI=unknown - 
DCXX_PREPENDS_UNDERSCORE=1
   -DHAVE_LIBM=1 -DHAVE_QHULL=1 -DHAVE_PCRE=1 -DHAVE_REGEXEC=1
   -DHAVE_REGEX=1 -DHAVE_ZLIB_H=1 -DHAVE_ZLIB=1 -DHAVE_HDF5_H=1
   -DHAVE_HDF5=1 -DHAVE_H5GGET_NUM_OBJS=1 -DHAVE_FFTW3=1 -DHAVE_GLPK_H=1
   -DHAVE_GLPK=1 -DHAVE_CURL_CURL_H=1 -DHAVE_CURL=1
   -DHAVE_IEEE754_DATA_FORMAT=1 -DF77_FUNC(name,NAME)=name ## _
   -DF77_FUNC_(name,NAME)=name ## _ -DHAVE_BLAS=1
   -DHAVE_SUITESPARSE_UMFPACK_H=1 -DHAVE_UMFPACK=1 - 
DUMFPACK_SEPARATE_SPLIT=1
   -DHAVE_SUITESPARSE_COLAMD_H=1 -DHAVE_COLAMD=1
   -DHAVE_SUITESPARSE_CCOLAMD_H=1 -DHAVE_CCOLAMD=1
   -DHAVE_SUITESPARSE_CHOLMOD_H=1 -DHAVE_CHOLMOD=1 - 
DHAVE_SUITESPARSE_CS_H=1
   -DHAVE_CXSPARSE=1 -DHAVE_GETHOSTNAME=1 -DHAVE_GETPWNAM=1 - 
DHAVE_DEV_T=1
   -DHAVE_INO_T=1 -DHAVE_NLINK_T=1 -DHAVE_NLINK_T=1 - 
DHAVE_LONG_LONG_INT=1
   -DHAVE_UNSIGNED_LONG_LONG_INT=1 -DHAVE_SIGSET_T=1 - 
DHAVE_SIG_ATOMIC_T=1
   -DSIZEOF_SHORT=2 -DSIZEOF_INT=4 -DSIZEOF_LONG=4 -DSIZEOF_LONG_LONG=8
   -DHAVE_ALLOCA_H=1 -DHAVE_ALLOCA=1 -DNPOS=std::string::npos
   -DHAVE_PLACEMENT_DELETE=1 -DHAVE_DYNAMIC_AUTO_ARRAYS=1 - 
DSTDC_HEADERS=1
   -DHAVE_DIRENT_H=1 -DTIME_WITH_SYS_TIME=1 -DHAVE_SYS_WAIT_H=1
   -DHAVE_ASSERT_H=1 -DHAVE_CURSES_H=1 -DHAVE_DLFCN_H=1 -DHAVE_FCNTL_H=1
   -DHAVE_FLOAT_H=1 -DHAVE_GRP_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_LIMITS_H=1
   -DHAVE_LOCALE_H=1 -DHAVE_MEMORY_H=1 -DHAVE_NCURSES_H=1 - 
DHAVE_POLL_H=1
   -DHAVE_PWD_H=1 -DHAVE_STDINT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1
   -DHAVE_SYS_IOCTL_H=1 -DHAVE_SYS_PARAM_H=1 -DHAVE_SYS_POLL_H=1
   -DHAVE_SYS_RESOURCE_H=1 -DHAVE_SYS_SELECT_H=1 -DHAVE_SYS_STAT_H=1
   -DHAVE_SYS_TIME_H=1 -DHAVE_SYS_TIMES_H=1 -DHAVE_SYS_TYPES_H=1
   -DHAVE_SYS_UTSNAME_H=1 -DHAVE_TERMCAP_H=1 -DHAVE_UNISTD_H=1
   -DHAVE_UTIME_H=1 -DHAVE_SSTREAM=1 -DHAVE_SGTTY_H=1 -DHAVE_GLOB_H=1
   -DHAVE_FNMATCH_H=1 -DHAVE_FNMATCH=1 -DHAVE_GLOB=1 -DHAVE_ATEXIT=1
   -DHAVE_BASENAME=1 -DHAVE_BCOPY=1 -DHAVE_BZERO=1 -DHAVE_CHMOD=1
   -DHAVE_DUP2=1 -DHAVE_ENDGRENT=1 -DHAVE_ENDPWENT=1 -DHAVE_EXECVP=1
   -DHAVE_FCNTL=1 -DHAVE_FORK=1 -DHAVE_GETCWD=1 -DHAVE_GETEGID=1
   -DHAVE_GETEUID=1 -DHAVE_GETGID=1 -DHAVE_GETGRENT=1 -DHAVE_GETGRGID=1
   -DHAVE_GETGRNAM=1 -DHAVE_GETPGRP=1 -DHAVE_GETPID=1 -DHAVE_GETPPID=1
   -DHAVE_GETPWENT=1 -DHAVE_GETPWUID=1 -DHAVE_GETTIMEOFDAY=1 - 
DHAVE_GETUID=1
   -DHAVE_GETWD=1 -DHAVE_KILL=1 -DHAVE_LGAMMA=1 -DHAVE_LINK=1
   -DHAVE_LOCALTIME_R=1 -DHAVE_LSTAT=1 -DHAVE_MEMMOVE=1 -DHAVE_MKDIR=1
   -DHAVE_MKFIFO=1 -DHAVE_MKSTEMP=1 -DHAVE_PIPE=1 -DHAVE_POLL=1
   -DHAVE_PUTENV=1 -DHAVE_RAISE=1 -DHAVE_READLINK=1 -DHAVE_REALPATH=1
   -DHAVE_RENAME=1 -DHAVE_RINDEX=1 -DHAVE_RMDIR=1 -DHAVE_ROUND=1
   -DHAVE_SELECT=1 -DHAVE_SETGRENT=1 -DHAVE_SETLOCALE=1 - 
DHAVE_SETPWENT=1
   -DHAVE_SETVBUF=1 -DHAVE_SIGACTION=1 -DHAVE_SIGLONGJMP=1 - 
DHAVE_SIGPENDING=1
   -DHAVE_SIGPROCMASK=1 -DHAVE_SIGSUSPEND=1 -DHAVE_SNPRINTF=1 - 
DHAVE_STAT=1
   -DHAVE_STRCASECMP=1 -DHAVE_STRDUP=1 -DHAVE_STRERROR=1 - 
DHAVE_STRNCASECMP=1
   -DHAVE_STRPTIME=1 -DHAVE_STRSIGNAL=1 -DHAVE_SYMLINK=1 - 
DHAVE_TEMPNAM=1
   -DHAVE_TGAMMA=1 -DHAVE_UMASK=1 -DHAVE_UNAME=1 -DHAVE_UNLINK=1
   -DHAVE_USLEEP=1 -DHAVE_UTIME=1 -DHAVE_VFPRINTF=1 -DHAVE_VSPRINTF=1
   -DHAVE_VSNPRINTF=1 -DHAVE_WAITPID=1 -DHAVE_STRFTIME=1 - 
DHAVE_DYLD_API=1
   -DENABLE_DYNAMIC_LINKING=1 -DHAVE_TIMEVAL=1 -DHAVE_FINITE=1
   -DHAVE_ISNAN=1 -DHAVE_ISINF=1 -DHAVE_COPYSIGN=1 -DHAVE_DECL_SIGNBIT=1
   -DHAVE_ACOSH=1 -DHAVE_ASINH=1 -DHAVE_ATANH=1 -DHAVE_ERF=1 - 
DHAVE_ERFC=1
   -DHAVE_EXP2=1 -DHAVE_LOG2=1 -DHAVE_STRUCT_STAT_ST_BLKSIZE=1
   -DHAVE_STRUCT_STAT_ST_BLOCKS=1 -DHAVE_STRUCT_STAT_ST_RDEV=1
   -DHAVE_STRUCT_TM_TM_ZONE=1 -DHAVE_TM_ZONE=1 -DUSE_READLINE=1
   -DEXCEPTION_IN_MATH=1 -DRETSIGTYPE=void -DHAVE_DECL_SYS_SIGLIST=1
   -DHAVE_POSIX_SIGNALS=1 -DRETSIGTYPE_IS_VOID=1 -DHAVE_GETRUSAGE=1
   -DHAVE_TIMES=1 -DYYTEXT_POINTER=1 -DGNUPLOT_BINARY="gnuplot"

User-preferences (please do not edit this section):
--------------------------------------------------

   EDITOR = mate
   EXEC_PATH = /sw/lib/octave/3.0.5/site/exec/i386-apple-darwin:/sw/ 
lib/octave/api-v32/site/exec/i386-apple-darwin:/sw/lib/octave/site/ 
exec/i386-apple-darwin:/sw/lib/octave/3.0.5/exec/i386-apple-darwin:/sw/ 
bin:/sw/bin:/sw/sbin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/ 
X11/bin:/usr/X11R6/bin
   IMAGE_PATH = .:/sw/share/octave/3.0.5/imagelib
   PAGER = less
   PS1 = \s:\#>
   PS2 = >
   PS4 = +
   beep_on_error = 0
   completion_append_char =
   crash_dumps_octave_core = 1
   echo_executing_commands = 0
   fixed_point_format = 0
   gnuplot_binary = gnuplot
   gnuplot_command_end =

   gnuplot_command_plot = pl
   gnuplot_command_replot = rep
   gnuplot_command_splot = sp
   gnuplot_command_title = t
   gnuplot_command_using = u
   gnuplot_command_with = w
   history_file = /Users/bpabbott/.octave_hist
   history_size = 1024
   ignore_function_time_stamp = system
   info_file = /sw/share/info/octave.info
   info_program = info
   makeinfo_program = makeinfo
   max_recursion_depth = 256
   output_max_field_width = 5
   output_precision = 5
   page_output_immediately = 0
   page_screen_output = 1
   print_answer_id_name = 1
   print_empty_dimensions = 1
   save_precision = 16
   saving_history = 1
   sighup_dumps_octave_core = 1
   sigterm_dumps_octave_core = 1
   silent_functions = 0
   split_long_rows = 1
   string_fill_char =
   struct_levels_to_print = 2
   suppress_verbose_help_message = 0



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